xfiles vs fringe (spoiler alert)

Many Tweeters noted last night that Fringe seemed to be a rehash of X-Files episode Home. Several went on to make disparaging comparisons between Xfiles and Fringe. However, I would say they missed the point.
Sure, there was a similarity between Johari Window and Home, in that both dealt with hideously deformed people. But that is where the similarity ends.
In Home, the people were deformed due to generations of inbreeding, chosen by the family themselves. They were violent by choice and driven by their own choices into the horror of their lives. In Johari Window, the people were deformed due to secret government/military experiments, which affected all the living creatures within the town - victims of the choices of others rather than of their own choices, and not universally violent, especially as shown in the end when one victim chose truth over concealment (although she did use violence to achieve that end).
This gets to one of the primary differences between XFiles and Fringe. In XFiles, the monsters and the mythology were driven by the existence and intervention of aliens - monsters were weird hybrids or results of alien experimentation, and the government conspiracy related primarily to the existence of aliens and their coming invasion. People were made who they were by their choices, or driven by their biology. In Fringe, the monsters and mythology are driven by unethical experimentation on willing and unwilling subjects, which Walter himself participated in. The people are driven by the results of other people's choices for them - they are victims. Further, the conspiracy is not, so far, well connected between evil individuals (David Robert Jones), massive corporations (Massive Dynamic), and the government/military (Russian cosmonauts, Johari Window).
In the X Files, a big focus was on the truth: what is it and how do we find it and prove it. In Fringe, the big focus is on the coming inter-dimensional war, and what is ethical in the face of that. William Bell still clearly believes that human experimentation is justified by this war, while Walter is learning that it is not, and is trying to make atonement. Yet Walter has still not dealt with one of his most heinous crimes, one which may be responsible for the coming war: the kidnapping of his own alternate son.
So yeah, Fringe borrows themes and ideas from X-Files, but they are examined and developed very very differently.